Software
Software developed by the "Algorithms in Bioinformatics" lab.
-
Copycat: Co-phylogenetic analysis tool
-
CrossLink: Sequence relationships between (micro) RNAs
-
Dendroscope: An interactive viewer for large phylogenetic trees
-
Darwin Rocks! Evolution of music
-
LOCAS: Low-coverage short-read assembler
- MEGAN: Metagenome analysis
- MEGAN5: Available for beta testing
-
Metasim: Sequencing simulator for genomes and metagenomes
-
microHARVESTER: microRNA predictor
-
NRPSpredictor: Specificity Prediction of Adenylation domains in NRPS
-
OSLay: Optimal Syntenic layout of unfinished assemblies
- PAT: Protein alignment tool
- PAUDA: High-throughput protein alignment
-
ReadSim: Sequencing simulator
-
SplitsTree4: Phylogenetic trees and networks
-
SplitsTree3.2: Old version of SplitsTree
-
2dTiler: Periodic tilings of the plane, sphere and hyperbolic plane
