Algorithms in Bioinformatics

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Crosslink Download

To run CrossLink locally, you will need to have the following software installed on your system:

Then, download the following jar file for the CrossLink version of your choice:

  • (Replace "VERSION" with a current CrossLink version, e.g. "1.2.6". Find a list of available versions here.)


  • Start with: java -cp CLASSPATH x.CrossLink STANDALONE

  • Have fun.

We run CrossLink on Linux and would strongly recommend a UNIX style OS --- however, in principle CrossLink could run standalone on any operating system that supports NCBI BLAST, Vmatch, RNAhybrid and a Java Runtime.

Please note that use of CrossLink is subject to these terms and conditions: CrossLink license
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