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Old datasets

MEGAN 1 datasets associated with the original 2007 MEGAN paper.

Old datasets

 

Here are links to data sets used in our paper "MEGAN Analysis of Metagenome Data" which appeared in Genome Research. Please note that these datasets are for use with MEGAN1.0. We will soon replace them with new files compatible with MEGAN 3.

Sargasso Sea Subsample 1
10,000 Sanger reads
BLASTX-NR
MEGAN file
Sargasso Sea Subsample 2-4
10,000 Sanger reads BLASTX-NR MEGAN file
Mammoth dataset
BLASTX-NR MEGAN file
E. coli K12
2000 SBS reads
BLASTX-NR MEGAN file
MEGAN file without K12 hits
Bdellovibrio bacteriovorus  HD100
2000 SBS reads
BLASTX-NR MEGAN file
MEGAN file without HD100 hits

 
Simulated datasets used in the paper:

E. coli K12, simulated reads ~35 bp
5000 SBS reads
MEGAN file
E. coli K12, simulated reads ~100 bp 5000 SBS reads MEGAN file
E. coli K12, simulated reads ~200 bp 5000 SBS reads MEGAN file
E. coli K12, simulated reads ~800 bp 5000 SBS reads MEGAN file
B. bacteriovorus  HD100, simulated reads ~35 bp
5000 SBS reads MEGAN file
B. bacteriovorus  HD100, simulated reads ~100 bp 5000 SBS reads MEGAN file
B. bacteriovorus  HD100, simulated reads ~200 bp 5000 SBS reads MEGAN file
B. bacteriovorus  HD100, simulated reads ~800 bp 5000 SBS reads MEGAN file

 

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