Algorithms in Bioinformatics


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Algorithms in Bioinformatics

Welcome to Daniel Huson's Lab

The main focus of our lab is on developing new and advanced algorithms for bioinformatics. Here is a short list of our current main research interests:

  • Phylogenetic networks and trees
  • Metagenome analysis and simulation
  • Genome resequencing and analysis
  • Evolution and ecology
  • Models, algorithms, software and complexity

For more details, see the research section and our list of publications.

Most recent publications:

Willmann, M, El-Hadidi, M, Huson, DH, Schuetz, M, Weidenmaier, C, Autenrieth, IB, and Peter, S (2015). Antibiotic selection pressure determination through sequence-based metagenomics. Antimicrobial Agents and Chemotherapy.

Damms-Machado, A, Mitra, S, Schollenberger, AE, Kramer, KM, Meile, T, Koenigsrainer, A, Huson, DH, and Bischoff, SC (2015). Effects of Surgical and Dietary Weight Loss Therapy for Obesity on Gut Microbiota Composition and Nutrient Absorption. BioMed Research International, 2015.

Recent news:

Available positions: Postdoc and Phd positions available to work on algorithms for taxonomic and medical analysis of very long, error-prone DNA sequencing reads on a mobile computer

Conference on Personalized Medicine: 20-23 May 2016 in Tuebingen

Third BEST Summer School: The third annual BEST (Bioinformatics exchange of students and teachers) summer school to be held in Heiligkreuztal July 17-23, 2016